Identification and classification of duplicated genesUpdated 2 months ago

Fabricio Almeida-Silva, Yves Van de Peer

Rendered from doubletrouble_vignette.Rmd in doubletrouble 1.7.0.
Inference and Analysis of Synteny NetworksUpdated 8 months ago

Fabricio Almeida-Silva, Tao Zhao, Kristian K Ullrich, Yves Van de Peer

Rendered from syntenet.Rmd in syntenet 1.9.0.
Comparative transcriptomic analysis of hybrids and their progenitorsUpdated 9 months ago

Fabricio Almeida-Silva, Lucas Prost-Boxoen, Yves Van de Peer

Rendered from HybridExpress.Rmd in HybridExpress 1.3.0.
Assessing orthogroup inferenceUpdated 1 years ago

Fabricio Almeida-Silva, Yves Van de Peer

Rendered from vignette_02_assessing_orthogroup_inference.Rmd in cogeqc 1.11.0.
Gene coexpression network inferenceUpdated 1 years ago

Fabricio Almeida-Silva, Thiago Motta Venancio

Rendered from vignette_01_GCN_inference.Rmd in BioNERO 1.15.0.
Gene regulatory network inferenceUpdated 1 years ago

Fabricio Almeida-Silva, Thiago Motta Venancio

Rendered from vignette_02_GRN_inference.Rmd in BioNERO 1.15.0.
Network comparison: consensus modules and module preservationUpdated 1 years ago

Fabricio Almeida-Silva, Thiago Motta Venancio

Rendered from vignette_03_network_comparison.Rmd in BioNERO 1.15.0.
Assessing genome assembly and annotation qualityUpdated 2 years ago

Fabricio Almeida-Silva, Yves Van de Peer

Rendered from vignette_01_assessing_genome_assembly.Rmd in cogeqc 1.11.0.
Genome-wide identification and classification of transcription factors in plant genomesUpdated 2 years ago

Fabricio Almeida-Silva, Yves Van de Peer

Rendered from vignette_planttfhunter.Rmd in planttfhunter 1.7.0.
Assessing synteny identificationUpdated 2 years ago

Fabricio Almeida-Silva, Yves Van de Peer

Rendered from vignette_03_assessing_synteny.Rmd in cogeqc 1.11.0.
Mining high-confidence candidate genes with cageminerUpdated 2 years ago

Fabricio Almeida-Silva, Thiago Motta Venancio

Rendered from cageminer.Rmd in cageminer 1.13.0.
Introduction to magreneUpdated 2 years ago

Fabricio Almeida-Silva, Yves Van de Peer

Rendered from magrene.Rmd in magrene 1.9.0.